Description
pbbam - PacBio BAM C++ library, with SWIG bindings
| Property |
Value |
| Distribution |
FreeBSD 12 |
| Repository |
FreeBSD Ports Quarterly i386 |
| Package filename |
pbbam-0.18.0_3.txz |
| Package name |
pbbam |
| Package version |
0.18.0 |
| Package release |
3 |
| Package architecture |
i386 |
| Package type |
txz |
| Category |
biology |
| Homepage |
https://github.com/PacificBiosciences/pbbam |
| License |
BSD3CLAUSE |
| Maintainer |
jwb@FreeBSD.org |
| Download size |
620.32 KB |
| Installed size |
2.86 MB |
As of the 3.0 release of SMRTanalysis, PacBio is embracing the industry
standard BAM format for (both aligned and unaligned) basecall data files. We
have also formulated a BAM companion file format (bam.pbi) enabling fast access
to a richer set of per-read information as well as compatibility for software
built around the legacy cmp.h5 format.
The pbbam software package provides components to create, query, & edit PacBio
BAM files and associated indices. These components include a core C++ library,
bindings for additional languages, and command-line utilities.
WWW: https://github.com/PacificBiosciences/pbbam
Alternatives
Requires
Provides
| Name |
Value |
| libpbbam.so.0.18.0 |
- |
Download
| Type |
URL |
| Mirror |
pkg.freebsd.org |
| Binary Package |
pbbam-0.18.0_3.txz
|
| Source Package |
biology/pbbam
|
Install Howto
Install pbbam txz package:
# pkg install pbbam
See Also