primer3-2.3.6.txz


Advertisement

Description

primer3 - Primer3 helps to choose primers for PCR reactions

Property Value
Distribution FreeBSD 12
Repository FreeBSD Ports Quarterly amd64
Package filename primer3-2.3.6.txz
Package name primer3
Package version 2.3.6
Package release -
Package architecture amd64
Package type txz
Category biology
Homepage http://www-genome.wi.mit.edu/genome_software/other/primer3.html
License GPLv2
Maintainer ports@FreeBSD.org
Download size 100.05 KB
Installed size 285.02 KB
"Primer3 is a complete rewrite of the original PRIMER program
(Primer 0.5), written by Steve Lincoln, Mark Daly, and Eric
Lander.  See DIFFERENCES FROM EARLIER VERSIONS for a discussion
of how Primer3 differs from its predecessors, Primer 0.5 and
Primer v2.
Primer3 picks primers for PCR reactions, considering as criteria:
o oligonucleotide melting temperature, size, GC content,
and primer-dimer possibilities,
o PCR product size,
o positional constraints within the source sequence, and
o miscellaneous other constraints.
All of these criteria are user-specifiable as constraints, and
some are specifiable as terms in an objective function that
characterizes an optimal primer pair."
- from the README file
WWW: http://www-genome.wi.mit.edu/genome_software/other/primer3.html
===>   NOTICE:
The primer3 port currently does not have a maintainer. As a result, it is
more likely to have unresolved issues, not be up-to-date, or even be removed in
the future. To volunteer to maintain this port, please create an issue at:
https://bugs.freebsd.org/bugzilla
More information about port maintainership is available at:
https://www.freebsd.org/doc/en/articles/contributing/ports-contributing.html#maintain-port

Alternatives

Package Version Architecture Repository
primer3-2.3.6.txz 2.3.6 i386 FreeBSD Ports Quarterly
primer3-2.3.6.txz 2.3.6 amd64 FreeBSD Ports Latest
primer3-2.3.6.txz 2.3.6 i386 FreeBSD Ports Latest
primer3 - - -

Download

Type URL
Mirror pkg.freebsd.org
Binary Package primer3-2.3.6.txz
Source Package biology/primer3

Install Howto

Install primer3 txz package:

# pkg install primer3

See Also

Package Description
primesieve-7.4.26_1.txz Fast prime number generator
primme-2.2_2.txz Iterative eigensolver for symmetric and hermitian matrices
print-manager-19.08.1.txz Printer manager for KDE
print-n-times-1.0_1.txz Print a string (n) times
printscreen-1.4_1.txz Simple screenshot program for X11
prips-1.1.1.txz Prints IP subnet ranges by list or CIDR
privatebin-1.2.txz Simple end-to-end encrypting zero-knowledge paste-bin server
privoxy-3.0.28.txz Privoxy is a web proxy with advanced filtering capabilities
prng-3.0.2_3.txz Portable, high-performance ANSI-C pseudorandom number generators
procenv-0.51.txz Utility to show process environment
processing-1.5.1,1.txz Programming environment for images, animation, and interactions
prociono-g20110526_1.txz Roman serif with blackletter elements
procmail-3.22_10.txz Local mail delivery agent
procmap-1.0.txz Print the contents of a procfs map file
prodigal-2.6.3.2.txz Protein-coding gene prediction for prokaryotic genomes
Advertisement
Advertisement