pbseqan - Pacific Biosciences patched and stripped down SeqAn

Property Value
Distribution FreeBSD 12
Repository FreeBSD Ports Quarterly amd64
Package filename pbseqan-g20171011.txz
Package name pbseqan
Package version g20171011
Package release -
Package architecture amd64
Package type txz
Category biology
Homepage https://github.com/PacificBiosciences/seqan
Maintainer jwb@FreeBSD.org
Download size 1.02 MB
Installed size 10.84 MB
This is a public fork of the SeqAn Library v2.0.0, stripped down to just the
header files and with a few custom fixes.
Some of PacBio's tools depend on SeqAn for efficient implementations of some
common data-structures for sequence analysis (A huge thanks to SeqAn
development team!). However PacBio only uses a small amount of the SeqAn
code-base, and in addition requires a few minor fixes that didn't make it in to
the initial release of SeqAn v2.0.0. Thus to minimize confusion and band-width,
we will depend on this fork instead of SeqAn proper.
WWW: https://github.com/PacificBiosciences/seqan
===>   NOTICE:
This port is deprecated; you may wish to reconsider installing it:
Upstream merged into SeqAn project: Use biology/seqan.


Package Version Architecture Repository
pbseqan-g20171011.txz g20171011 i386 FreeBSD Ports Quarterly
pbseqan-g20171011.txz g20171011 amd64 FreeBSD Ports Latest
pbseqan-g20171011.txz g20171011 i386 FreeBSD Ports Latest
pbseqan - - -


Type URL
Mirror pkg.freebsd.org
Binary Package pbseqan-g20171011.txz
Source Package biology/pbseqan

Install Howto

Install pbseqan txz package:

# pkg install pbseqan

See Also

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