pbseqan-g20171011.txz


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Description

pbseqan - Pacific Biosciences patched and stripped down SeqAn

Property Value
Distribution FreeBSD 12
Repository FreeBSD Ports Quarterly amd64
Package filename pbseqan-g20171011.txz
Package name pbseqan
Package version g20171011
Package release -
Package architecture amd64
Package type txz
Category biology
Homepage https://github.com/PacificBiosciences/seqan
License BSD3CLAUSE
Maintainer jwb@FreeBSD.org
Download size 1.02 MB
Installed size 10.84 MB
This is a public fork of the SeqAn Library v2.0.0, stripped down to just the
header files and with a few custom fixes.
Some of PacBio's tools depend on SeqAn for efficient implementations of some
common data-structures for sequence analysis (A huge thanks to SeqAn
development team!). However PacBio only uses a small amount of the SeqAn
code-base, and in addition requires a few minor fixes that didn't make it in to
the initial release of SeqAn v2.0.0. Thus to minimize confusion and band-width,
we will depend on this fork instead of SeqAn proper.
WWW: https://github.com/PacificBiosciences/seqan
===>   NOTICE:
This port is deprecated; you may wish to reconsider installing it:
Upstream merged into SeqAn project: Use biology/seqan.

Alternatives

Package Version Architecture Repository
pbseqan-g20171011.txz g20171011 i386 FreeBSD Ports Quarterly
pbseqan-g20171011.txz g20171011 amd64 FreeBSD Ports Latest
pbseqan-g20171011.txz g20171011 i386 FreeBSD Ports Latest
pbseqan - - -

Download

Type URL
Mirror pkg.freebsd.org
Binary Package pbseqan-g20171011.txz
Source Package biology/pbseqan

Install Howto

Install pbseqan txz package:

# pkg install pbseqan

See Also

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pccts-1.33.33.txz Purdue Compiler Construction Tool Set
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pcemu-1.01b_5.txz 8086 PC emulator, by David Hedley
pcf2bdf-1.06.txz Convert X font from PCF to BDF
pcgen-6.06.01_1.txz Java-based RPG character generator and maintenance program
pchecker-1.23.txz Tool that checks the ports tree for various errors
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