infernal-1.1.2.txz


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Description

infernal - Search sequence databases for structural RNA homologs

Property Value
Distribution FreeBSD 12
Repository FreeBSD Ports Quarterly amd64
Package filename infernal-1.1.2.txz
Package name infernal
Package version 1.1.2
Package release -
Package architecture amd64
Package type txz
Category biology
Homepage http://eddylab.org/infernal/
License BSD3CLAUSE
Maintainer mzaki@niid.go.jp
Download size 3.54 MB
Installed size 25.81 MB
Infernal, standing for "INFERence of RNA ALignment", is a tool for searching
DNA sequence database for RNA structure and sequence similarities.
It is based on Covariance Model (CM), which scores a combination of sequence
consensus and RNA secondary structure consensus, and thus is more capable of
identifying RNA homologs than using primary sequence profile.
The Rfam database of RNA families is based on Infernal. 
Citation:
Nawrocki & Eddy (2013) Infernal 1.1: 100-fold faster RNA homology searches,
Bioinformatics 29: 2933-2935.
WWW: http://eddylab.org/infernal/
Options:
- DOCS: on
- EXAMPLES: on
- TEST: off

Alternatives

Package Version Architecture Repository
infernal-1.1.3.txz 1.1.3 amd64 FreeBSD Ports Latest
infernal-1.1.3.txz 1.1.3 i386 FreeBSD Ports Latest
infernal-1.1.2.txz 1.1.2 i386 FreeBSD Ports Quarterly
infernal - - -

Download

Type URL
Mirror pkg.freebsd.org
Binary Package infernal-1.1.2.txz
Source Package biology/infernal

Install Howto

Install infernal txz package:

# pkg install infernal

See Also

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