mafft-7.266.txz


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Description

mafft - Multiple alignment program for amino acid or nucleotide sequences

Property Value
Distribution FreeBSD 12
Repository FreeBSD Ports Latest amd64
Package name mafft
Package version 7.266
Package architecture amd64
Package type txz
Installed size 10.31 MB
Download size 897.08 KB
Official Mirror pkg.freebsd.org
MAFFT offers a range of multiple alignment strategies, L-INS-i
(accurate; recommended for <200 sequences), FFT-NS-i (standard speed and
accuracy), FFT-NS-2 (fast; recommended for >2,000 sequences), etc.
According to BAliBASE and other benchmark tests, L-INS-i is one of the
most accurate methods currently available.
MAFFT has been described:
K. Katoh and H. Toh 2008 (Briefings in Bioinformatics 9:286-298)
Recent developments in the MAFFT multiple sequence alignment program.
K. Katoh, K. Misawa, K. Kuma and T. Miyata (Nucleic Acids Res. 30:
3059-3066, 2002) MAFFT: a novel method for rapid multiple sequence
alignment based on fast Fourier transform.
WWW: http://mafft.cbrc.jp/alignment/software/
Categories: biology
Maintainer: cartwright@asu.edu
Options:
- DOCS: on
- EXAMPLES: on

Alternatives

Package Version Architecture Repository
mafft-7.266.txz 7.266 i386 FreeBSD Ports Latest
mafft-7.266.txz 7.266 amd64 FreeBSD Ports Quarterly
mafft-7.266.txz 7.266 i386 FreeBSD Ports Quarterly
mafft - - -

Download

Type URL
Binary Package mafft-7.266.txz
Source Package biology/mafft

Install Howto

Install mafft txz package:

# pkg install mafft

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