viennarna - Alignment tools for the structural analysis of RNA

Property Value
Distribution FreeBSD 11
Repository FreeBSD Ports Latest amd64
Package filename viennarna-2.4.13_1.txz
Package name viennarna
Package version 2.4.13
Package release 1
Package architecture amd64
Package type txz
Category biology
License ViennaRNALicense
Download size 10.09 MB
Installed size 80.43 MB
LocARNA is a collection of alignment tools for the structural analysis of RNA.
Given a set of RNA sequences, LocARNA simultaneously aligns and predicts common
structures for your RNAs. In this way, LocARNA performs Sankoff-like alignment
and is in particular suited for analyzing sets of related RNAs without known
common structure.
LocARNA distinguishes itself from many other Sankoff-style multiple alignment
programs by its performance and low memory complexity, high accuracy, and
richness of features. As unique features, it offers structure-local alignment,
flexible structure and anchor constraints, and provides efficient computation of
reliabilities in sequence-structure alignment. The package offers a robust core
of features and is used as experimental platform for the incorporation of new
features in RNA sequence-structure alignment.
- DOCS: on


Package Version Architecture Repository
viennarna-2.4.13_1.txz 2.4.13 i386 FreeBSD Ports Latest
viennarna-2.4.13.txz 2.4.13 amd64 FreeBSD Ports Quarterly
viennarna-2.4.13.txz 2.4.13 i386 FreeBSD Ports Quarterly
viennarna - - -


Name Value
gmp = 6.1.2_1
gsl = 2.5_1
indexinfo = 0.3.1
libX11 = 1.6.8,1
libXext = 1.3.4,1 - - - -
mpfr = 4.0.2
perl5 = 5.28.2


Type URL
Binary Package viennarna-2.4.13_1.txz
Source Package biology/viennarna

Install Howto

Install viennarna txz package:

# pkg install viennarna

See Also

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