velvet-1.2.10_2.txz


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Description

velvet - Sequence assembler for very short reads

Property Value
Distribution FreeBSD 11
Repository FreeBSD Ports Latest amd64
Package filename velvet-1.2.10_2.txz
Package name velvet
Package version 1.2.10
Package release 2
Package architecture amd64
Package type txz
Category biology
Homepage http://www.ebi.ac.uk/~zerbino/velvet/
License -
Maintainer mzaki@m.u-tokyo.ac.jp
Download size 614.57 KB
Installed size 957.98 KB
Velvet is a de novo genomic assembler specially designed for short read
sequencing technologies, such as Solexa or 454, developed by Daniel Zerbino
and Ewan Birney at the European Bioinformatics Institute (EMBL-EBI).
Citation:
Velvet: algorithms for de novo short read assembly using de Bruijn graphs.
D.R. Zerbino and E. Birney. Genome Research 18: 821-829 (2008)
WWW: http://www.ebi.ac.uk/~zerbino/velvet/
Options:
- DOCS: on

Alternatives

Package Version Architecture Repository
velvet-1.2.10_2.txz 1.2.10 i386 FreeBSD Ports Quarterly
velvet-1.2.10_2.txz 1.2.10 amd64 FreeBSD Ports Quarterly
velvet-1.2.10_2.txz 1.2.10 i386 FreeBSD Ports Latest
velvet - - -

Requires

Name Value
perl5 = 5.28.1_1
python36 = 3.6.8_2

Download

Type URL
Mirror pkg.freebsd.org
Binary Package velvet-1.2.10_2.txz
Source Package biology/velvet

Install Howto

Install velvet txz package:

# pkg install velvet

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