smoldyn-2.61.txz


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Description

smoldyn - Biochemical simulator for molecular diffusion, surface interactions

Property Value
Distribution FreeBSD 11
Repository FreeBSD Ports Latest amd64
Package filename smoldyn-2.61.txz
Package name smoldyn
Package version 2.61
Package release -
Package architecture amd64
Package type txz
Category science
Homepage http://www.smoldyn.org/
License LGPL3
Maintainer yuri@FreeBSD.org
Download size 429.46 KB
Installed size 1.13 MB
Smoldyn is a computer program for cell-scale biochemical simulations. It
simulates each molecule of interest individually to capture natural
stochasticity and to yield nanometer-scale spatial resolution. It treats other
molecules implicitly, enabling it to simulate hundreds of thousands of molecules
over several minutes of real time. Simulated molecules diffuse, react, are
confined by surfaces, and bind to membranes much as they would in a real
biological system.
Smoldyn is easy to use and easy to install. It is more accurate and faster than
other particle-based simulators. Smoldyn's unique features include:
a "virtual experimenter" who can manipulate or measure the simulated system,
support for spatial compartments, molecules with excluded volume, and
simulations in 1, 2, or 3 dimensions.
WWW: http://www.smoldyn.org/

Alternatives

Package Version Architecture Repository
smoldyn-2.61.txz 2.61 i386 FreeBSD Ports Latest
smoldyn-2.61.txz 2.61 i386 FreeBSD Ports Quarterly
smoldyn-2.61.txz 2.61 amd64 FreeBSD Ports Quarterly
smoldyn - - -

Requires

Name Value
freeglut = 3.0.0_2
libGL.so.1 -
libGLU = 9.0.0_3
libGLU.so.1 -
libXi = 1.7.10,1
libXi.so.6 -
libXmu = 1.1.3,1
libXmu.so.6 -
libglut.so.3 -
libtiff.so.5 -
mesa-libs = 18.3.2_1
tiff = 4.0.10_1

Download

Type URL
Mirror pkg.freebsd.org
Binary Package smoldyn-2.61.txz
Source Package science/smoldyn

Install Howto

Install smoldyn txz package:

# pkg install smoldyn

See Also

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