py36-pyteomics - Python modules for proteomics data analysis

Property Value
Distribution FreeBSD 11
Repository FreeBSD Ports Latest amd64
Package filename py36-pyteomics-4.1.2_1.txz
Package name py36-pyteomics
Package version 4.1.2
Package release 1
Package architecture amd64
Package type txz
Category python science
License APACHE20
Download size 247.27 KB
Installed size 1.77 MB
Pyteomics is a collection of lightweight and handy tools for Python that help to
handle various sorts of proteomics data. Pyteomics provides a growing set of
modules to facilitate the most common tasks in proteomics data analysis, such
- calculation of basic physico-chemical properties of polypeptides:
- mass and isotopic distribution
- charge and pI
- chromatographic retention time
- access to common proteomics data:
- MS or LC-MS data
- FASTA databases
- search engines output
- easy manipulation of sequences of modified peptides and proteins
The goal of the Pyteomics project is to provide a versatile, reliable and
well-documented set of open tools for the wide proteomics community. One of the
project's key features is Python itself, an open source language increasingly
popular in scientific programming. The main applications of the library are
reproducible statistical data analysis and rapid software prototyping.


Package Version Architecture Repository
py36-pyteomics-4.1.2_1.txz 4.1.2 i386 FreeBSD Ports Latest
py36-pyteomics-4.1.2_1.txz 4.1.2 i386 FreeBSD Ports Quarterly
py36-pyteomics-4.1.2_1.txz 4.1.2 amd64 FreeBSD Ports Quarterly
py36-pyteomics - - -


Name Value
py36-lxml = 4.3.4_1
py36-matplotlib = 2.2.4_1
py36-numpy = 1.16.4_1,1
py36-pandas = 0.24.2_1
py36-setuptools = 41.0.1
py36-sqlalchemy13 = 1.3.6
python36 = 3.6.9


Type URL
Binary Package py36-pyteomics-4.1.2_1.txz
Source Package science/py-pyteomics

Install Howto

Install py36-pyteomics txz package:

# pkg install py36-pyteomics

See Also

Package Description
py36-pytest-4.5.0.txz Simple powerful testing with Python
py36-pytest-aiohttp-0.3.0.txz Pytest plugin for aiohttp support
py36-pytest-asyncio-0.10.0.txz Py.test plugin providing fixtures and markers for asyncio
py36-pytest-cache-1.0.txz Pytest plugin with mechanisms for caching across test runs
py36-pytest-capturelog-0.7.txz Py.test plugin to capture log messages
py36-pytest-cov-2.7.1.txz Pytest plugin for measuring coverage
py36-pytest-django-3.3.0.txz Django plugin for py.test
py36-pytest-fixture-config-1.7.0.txz Fixture configuration utils for py.test
py36-pytest-flake8-1.0.4.txz pytest plugin to check FLAKE8 requirement
py36-pytest-flakes-4.0.0.txz Pytest plugin for efficiently checking python source with pyflakes
py36-pytest-forked-1.0.2.txz Run tests in isolated forked subprocesses
py36-pytest-helpers-namespace-2019.1.8.txz Provide a helpers namespace in pytest
py36-pytest-localserver-0.5.0.txz Py.test Plugin to test server connections locally
py36-pytest-mock-1.10.4.txz Thin wrapper around the mock package for easier use with py.test
py36-pytest-pycodestyle-1.4.0.txz Pytest plugin to run pycodestyle