kallisto - Quantify abundances of transcripts from RNA-Seq data

Property Value
Distribution FreeBSD 11
Repository FreeBSD Ports Latest amd64
Package filename kallisto-0.46.0_1.txz
Package name kallisto
Package version 0.46.0
Package release 1
Package architecture amd64
Package type txz
Category biology
Homepage https://pachterlab.github.io/kallisto/about.html
Maintainer jwb@FreeBSD.org
Download size 650.24 KB
Installed size 1.06 MB
Kallisto is a program for quantifying abundances of transcripts from RNA-Seq
data, or more generally of target sequences using high-throughput sequencing
reads. It is based on the novel idea of pseudoalignment for rapidly determining
the compatibility of reads with targets, without the need for alignment.
WWW: https://pachterlab.github.io/kallisto/about.html


Package Version Architecture Repository
kallisto-0.46.0_1.txz 0.46.0 i386 FreeBSD Ports Latest
kallisto-0.46.0_1.txz 0.46.0 i386 FreeBSD Ports Quarterly
kallisto-0.46.0_1.txz 0.46.0 amd64 FreeBSD Ports Quarterly
kallisto - - -


Name Value
hdf-szip = 2.1.1
hdf5 = 1.10.5_2
htslib = 1.9
libhdf5.so.103 -
libhts.so.2 -
libsz.so.2 -


Type URL
Mirror pkg.freebsd.org
Binary Package kallisto-0.46.0_1.txz
Source Package biology/kallisto

Install Howto

Install kallisto txz package:

# pkg install kallisto

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