GroopM-0.3.4_2.txz


Advertisement

Description

GroopM - Metagenomic binning suite

Property Value
Distribution FreeBSD 11
Repository FreeBSD Ports Latest amd64
Package filename GroopM-0.3.4_2.txz
Package name GroopM
Package version 0.3.4
Package release 2
Package architecture amd64
Package type txz
Category biology python
Homepage http://ecogenomics.github.io/GroopM/
License GPLv3
Maintainer yuri@FreeBSD.org
Download size 191.71 KB
Installed size 1.28 MB
GroopM is a metagenomic binning toolset. It leverages spatio-temoral
dynamics (differential coverage) to accurately (and almost automatically)
extract population genomes from multi-sample metagenomic datasets.
GroopM is largely parameter-free. Use: groopm -h for more info.
WWW: http://ecogenomics.github.io/GroopM/

Alternatives

Package Version Architecture Repository
GroopM-0.3.4_2.txz 0.3.4 i386 FreeBSD Ports Latest
GroopM-0.3.4_2.txz 0.3.4 i386 FreeBSD Ports Quarterly
GroopM-0.3.4_2.txz 0.3.4 amd64 FreeBSD Ports Quarterly
GroopM - - -

Requires

Name Value
py27-matplotlib = 2.2.4_1
py27-numpy = 1.16.4_1,1
py27-scipy = 1.2.2_1
py27-setuptools = 41.0.1
py27-tables = 3.5.2_1
python27 = 2.7.16_1

Download

Type URL
Mirror pkg.freebsd.org
Binary Package GroopM-0.3.4_2.txz
Source Package biology/groopm

Install Howto

Install GroopM txz package:

# pkg install GroopM

See Also

Package Description
GxSwitchlessWah-lv2-g20171206.txz Analog wah emulation with switchless activation
HVSC-Update-2.8.7.txz Update program for the HVSC C= 64 SID tune collection
Hasklig-1.1_1.txz Haskell code font with monospaced ligatures
Hermes-1.3.3_5.txz Fast pixel formats conversion library
HipMCL-g20180814_3.txz High-performance parallel algorithm for large-scale network clustering
Hyperlatex-emacs26-2.9.a_9.txz Produce HTML and printed documents from LaTeX source
Hyperlatex-emacs26_canna-2.9.a_9.txz Produce HTML and printed documents from LaTeX source
Hyperlatex-emacs26_nox-2.9.a_9.txz Produce HTML and printed documents from LaTeX source
Hyperlatex-emacs27-2.9.a_9.txz Produce HTML and printed documents from LaTeX source
Hyperlatex-emacs27_nox-2.9.a_9.txz Produce HTML and printed documents from LaTeX source
IPA-1.08_2.txz Image Processing Algorithms
Ice-3.6.4.txz Modern alternative to object middleware such as CORBA/COM/DCOM/COM+
Ice37-3.7.2_1.txz Modern alternative to object middleware such as CORBA/COM/DCOM/COM+
ImageMagick6-6.9.10.57,1.txz Image processing tools (legacy version)
ImageMagick6-nox11-6.9.10.57,1.txz Image processing tools (legacy version)
Advertisement
Advertisement