bcftools - Tools for manipulating next-generation sequencing data

Property Value
Distribution FreeBSD 10
Repository FreeBSD Ports Quarterly i386
Package name bcftools
Package version 1.9
Package architecture i386
Package type txz
Installed size 1.45 MB
Download size 475.32 KB
Official Mirror pkg.freebsd.org
BCFtools is a set of utilities that manipulate variant calls in the
Variant Call Format (VCF) and its binary counterpart BCF. All
commands work transparently with both VCFs and BCFs, both
uncompressed and BGZF-compressed.
WWW: http://www.htslib.org/
Categories: biology
Maintainer: cartwright@asu.edu
- GPL: on


Package Version Architecture Repository
bcftools-1.9.txz 1.9 amd64 FreeBSD Ports Quarterly
bcftools-1.9.txz 1.9 amd64 FreeBSD Ports Latest
bcftools-1.9.txz 1.9 i386 FreeBSD Ports Latest
bcftools - - -


Name Value
gsl = 2.5
htslib = 1.9
libhts.so.2 -


Type URL
Binary Package bcftools-1.9.txz
Source Package biology/bcftools

Install Howto

Install bcftools txz package:

# pkg install bcftools

See Also

Package Description
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bcpp-20150811.txz Utility similar to indent for C++ code
bcrypt-1.1.txz Cross-platform blowfish encryption utility
bctoolbox-0.2.0_6.txz Belledonne Communications utility library
bcunit-3.0.2.txz Fork of defunct project CUnit, with several fixes and patches applied
bcwipe-1.9.13.txz BCWipe securely erases data from magnetic and solid-state memory
bddsolve-1.04_3.txz BDD-based satisfiability and reachability solver
bdelta-0.3.1.txz Advanced delta creator, patcher, and library
bdes-1993.txz Encrypt/decrypt using the Data Encryption Standard (DES)
bdfresize-1.5_2.txz Tool for resizing BDF format font
bdftopcf-1.1_2.txz Convert X font from BDF to PCF
be-aspell-0.01_1,2.txz Aspell Belarusian dictionary
be-libreoffice-6.0.5.txz be language pack for libreoffice